by Institution Author "Aydin, Zafer"
Now showing items 1-7 of 7
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A Continuously Benchmarked and Crowdsourced Challenge for Rapid Development and Evaluation of Models to Predict COVID-19 Diagnosis and Hospitalization
Yan, Yao; Schaffter, Thomas; Bergquist, Timothy; Yu, Thomas; Prosser, Justin; Aydin, Zafer; Jabeer, Amhar; Brugere, Ivan; Gao, Jifan; Chen, Guanhua; Causey, Jason; Yao, Yuxin; Bryson, Kevin; Long, Dustin R.; Jarvik, Jeffrey G.; Lee, Christoph, I; Wilcox, Adam; Guinney, Justin; Mooney, Sean (AMER MEDICAL ASSOC330 N WABASH AVE, STE 39300, CHICAGO, IL 60611-5885, 2021)IMPORTANCE Machine learning could be used to predict the likelihood of diagnosis and severity of illness. Lack of COVID-19 patient data has hindered the data science community in developing models to aid in the response ... -
Crowdsourcing digital health measures to predict Parkinson's disease severity: the Parkinson's Disease Digital Biomarker DREAM Challenge
Aydin, Zafer; Sieberts, Solveig K.; Schaff, Jennifer; Duda, Marlena; Pataki, Balint Armin; Sun, Ming; Snyder, Phil; Daneault, Jean-Francois; Parisi, Federico; Costante, Gianluca; Rubin, Udi; Banda, Peter; Chae, Yooree; Chaibub Neto, Elias; Dorsey, E. Ray; Chen, Aipeng; Elo, Laura L.; Espino, Carlos; Glaab, Enrico; Goan, Ethan; Golabchi, Fatemeh Noushin; Gormez, Yasin; Jaakkola, Maria K.; Jonnagaddala, Jitendra; Klen, Riku; Li, Dongmei; McDaniel, Christian; Perrin, Dimitri; Perumal, Thanneer M.; Rad, Nastaran Mohammadian; Rainaldi, Erin; Sapienza, Stefano; Schwab, Patrick; Shokhirev, Nikolai; Venalainen, Mikko S.; Vergara-Diaz, Gloria; Zhang, Yuqian; Wang, Yuanjia; Guan, Yuanfang; Brunner, Daniela; Bonato, Paolo; Mangravite, Lara M.; Omberg, Larsson (NATURE RESEARCHHEIDELBERGER PLATZ 3, BERLIN 14197, GERMANY, 2021)Consumer wearables and sensors are a rich source of data about patients' daily disease and symptom burden, particularly in the case of movement disorders like Parkinson's disease (PD). However, interpreting these complex ... -
Data Mining Techniques in Direct Marketing on Imbalanced Data using Tomek Link Combined with Random Under-sampling
Ümit Yilmaz; Zafer Aydin; V. Çağri Güngör; Cengiz Gezer (Association for Computing Machinery, 2021)Determining the potential customers is very important in direct marketing. Data mining techniques are one of the most important methods for companies to determine potential customers. However, since the number of potential ... -
The Determination of Distinctive Single Nucleotide Polymorphism Sets for the Diagnosis of Behçet's Disease
Isik, Yunus EMRE; Gormez, Yasin; Aydin, Zafer; Bakir-Gungor, Burcu (Institute of Electrical and Electronics Engineers Inc., 2021)Behçet's Disease (BD) is a multi-system inflammatory disorder in which the etiology remains unclear. The most probable hypothesis is that genetic tendency and environmental factors play roles in the development of BD. In ... -
IGPRED: Combination of convolutional neural and graph convolutional networks for protein secondary structure prediction
Gormez, Yasin; Sabzekar, Mostafa; Aydin, Zafer (WILEY111 RIVER ST, HOBOKEN 07030-5774, NJ, 2021)There is a close relationship between the tertiary structure and the function of a protein. One of the important steps to determine the tertiary structure is protein secondary structure prediction (PSSP). For this reason, ... -
A noise-aware feature selection approach for classification
Sabzekar, Mostafa (SPRINGERONE NEW YORK PLAZA, SUITE 4600 , NEW YORK, NY 10004, UNITED STATES, 2021)A noise-aware version of support vector machines is utilized for feature selection in this paper. Combining this method and sequential backward search (SBS), a new algorithm for removing irrelevant features is proposed. ... -
Open Source Slurm Computer Cluster System Design and a Sample Application
Azginoglu, Nuh; Atasever, Mehmet Umt; Aydin, Zafer; Celik, Mete; Erbay, Hasan (IEEE345 E 47TH ST, NEW YORK, NY 10017 USA, 2017)Cluster computing combines the resources of multiple computers as they act like a single high-performance computer. In this study, a computer cluster consisting of Lustre distributed file system with one cluster server ...
