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A crowdsourced analysis to identify ab initio molecular signatures predictive of susceptibility to viral infection 

Fourati, Slim; Talla, Aarthi; Mahmoudian, Mehrad; Burkhart, Joshua G.; Klén, Riku; Henao, Ricardo; Yu, Thomas; Aydın, Zafer; Yeung, Ka Yee; Ahsen, Mehmet Eren; Almugbel, Reem; Jahandideh, Samad; Liang, Xiao; Nordling, Torbjörn E.M.; Shiga, Motoki; Stanescu, Ana; Vogel, Robert; Pandey, The Respiratory Viral DREAM Challenge Consortium# , Gaurav; Chiu, Christopher; McClain, Micah T.; Woods, Christopher W.; Ginsburg, Geoffrey S.; Elo, Laura L.; Tsalik, Ephraim L.; Mangravite, Lara M.; Sieberts, Solveig K. (NATURE PUBLISHING GROUP, MACMILLAN BUILDING, 4 CRINAN ST, LONDON N1 9XW, ENGLAND, 2018)
The response to respiratory viruses varies substantially between individuals, and there are currently no known molecular predictors from the early stages of infection. Here we conduct a community-based analysis to determine ...
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Integrated querying and version control of context-specific biological networks 

Cowman, Tyler; Coskun, Mustafa; Grama, Ananth; Koyuturk, Mehmet (OXFORD UNIV PRESS, GREAT CLARENDON ST, OXFORD OX2 6DP, ENGLAND, 2020)
Motivation: Biomolecular data stored in public databases is increasingly specialized to organisms, context/pathology and tissue type, potentially resulting in significant overhead for analyses. These networks are often ...
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PANOGA: a web server for identification of SNP-targeted pathways from genome-wide association study data 

Bakir-Gungor, Burcu; Egemen, Ece; Sezerman, Osman Ugur (OXFORD UNIV PRESS, GREAT CLARENDON ST, OXFORD OX2 6DP, ENGLAND, 2014)
Genome-wide association studies (GWAS) have revolutionized the search for the variants underlying human complex diseases. However, in a typical GWAS, only a minority of the single-nucleotide polymorphisms (SNPs) with the ...
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Integrated querying and version control of context-specific biological networks 

Cowman, Tyler; Coskun, Mustafa; Grama, Ananth; Koyuturk, Mehmet (OXFORD UNIV PRESS, GREAT CLARENDON ST, OXFORD OX2 6DP, ENGLAND, APR 15 202)
Motivation: Biomolecular data stored in public databases is increasingly specialized to organisms, context/pathology and tissue type, potentially resulting in significant overhead for analyses. These networks are often ...



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AuthorCoskun, Mustafa (2)Cowman, Tyler (2)Grama, Ananth (2)Koyuturk, Mehmet (2)Ahsen, Mehmet Eren (1)Almugbel, Reem (1)Aydın, Zafer (1)Bakir-Gungor, Burcu (1)Burkhart, Joshua G. (1)Chiu, Christopher (1)... View MoreSubject
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ALGORITHM (2)CHALLENGE (1)ENSEMBLES (1)EXPRESSION PROFILES (1)GENE (1)GLYCOPHORINS (1)HEME OXYGENASE (1)HUMAN ERYTHROCYTE-MEMBRANES (1)INFLUENZA-VIRUS INFECTION (1)... View MorePublication Typearticle (4)Languageeng (4)Publication CategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı (3)Makale - Uluslararası - Editör Denetimli Dergi (1)Access Typeinfo:eu-repo/semantics/openAccess (4)Date Issued2014 (1)2018 (1)2020 (1)Has File(s)Yes (4)

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