• Integrating Biological Domain Knowledge with Machine Learning for Identifying Colorectal-Cancer-Associated Microbial Enzymes in Metagenomic Data 

  Bakir-Gungor, Burcu; Ersoz, Nur Sebnem; Yousef, Malik (MDPI, 2025)

  Advances in metagenomics have revolutionized our ability to elucidate links between the microbiome and human diseases. Colorectal cancer (CRC), a leading cause of cancer-related mortality worldwide, has been associated ...

• Axial free vibration analysis of a tapered nanorod using Adomian decomposition method 

  Coskun, Safa B.; Kara, Ozge; Atay, Mehmet T. (TECHNO-PRESS, 2025)

  This study aimed to conduct an analysis of the axial free vibration of tapered nanorods based on nonlocal elasticity theory. The small-scale effect on the free axial vibration of a tapered nanorod was studied employing the ...

• Horseradish peroxidase (HRP) nanoflowers-mediated polymerization of vinyl monomers 

  Ozaydin, Gulbahar; Mirioglu, Muge; Kaplan, Naime; Dadi, Seyma; Ocsoy, Ismail; Gokturk, Ersen (SPRINGER NATURE LINK, 2024)

  The effects of flower-shaped hybrid nano biocatalyst (hFe-NFs) from coordination between horseradish peroxidase (HRP) enzyme and Fe2+ ions on the free-radical polymerization reactions of three different vinyl monomers ...

• Electrochemical and Optical Multi-Detection of Escherichia coli Through Magneto-Optic Nanoparticles: A Pencil-on-Paper Biosensor 

  Soysaldi, Furkan; Ekici, Derya Dincyurek; Soylu, Mehmet cagri; Mutlugun, Evren (MDPI, 2024)

  Escherichia coli (E. coli) detection suffers from slow analysis time and high costs, along with the need for specificity. While state-of-the-art electrochemical biosensors are cost-efficient and easy to implement, their ...

• Discovery of a C-S lyase inhibitor for the prevention of human body malodor formation: tannic acid inhibits the thioalcohol production in Staphylococcus hominis 

  Fidan, Ozkan; Karipcin, Ayse Doga; Kose, Ayse Hamide; Anaz, Ayse; Demirsoy, Beyza Nur; Arslansoy, Nuriye; Sun, Lei; Mujwar, Somdutt (SPRINGER NATURE LINK, 2025)

  Human body odor is a result of the bacterial biotransformation of odorless precursor molecules secreted by the underarm sweat glands. In the human axilla, Staphylococcus hominis is the predominant bacterial species responsible ...

• TextNetTopics-SFTS-SBTS: TextNetTopics Scoring Approaches Based Sequential Forward and Backward 

  Voskergian, Daniel; Bakir-Gungor, Burcu; Yousef, Malik (Springer Science and Business Media Deutschland GmbH, 2024)

  TextNetTopics is a text classification-based topic modeling approach that performs topic selection rather than word selection to train a machine learning algorithm. However, one main limitation of TextNetTopics is that its ...

• Classification of Breast Cancer Molecular Subtypes with Grouping-Scoring-Modeling Approach that Incorporates Disease-Disease Association Information 

  Qumsiyeh, Emma; Bakir-Gungor, Burcu; Yousef, Malik (IEEE Xplore, 2024)

  This study uses modern sequencing technology and large biological databases to investigate the molecular intricacies of complicated diseases like cancer. Using gene expression databases and biomarkers, the research aims ...

• N-Type Molecular Thermoelectrics Based on Solution-Doped Indenofluorene-Dimalononitrile: Simultaneous Enhancement of Doping Level and Molecular Order 

  Wang, Suhao; Wei, Huan; Rillaerts, Antoine; Deneme, Ibrahim; Depriester, Michael; Manikandan, Suraj; Andreasen, Jens Wenzel; Daoudi, Abdelylah; Peralta, Sebastien; Longuemart, Stephane; Usta, Hakan; Cornil, Jerome; Hu, Yuanyuan; Pisula, Wojciech (WILEY- Advanced, 2025)

  The development of n-type organic thermoelectric materials, especially π-conjugated small molecules, lags far behind their p-type counterparts, due primarily to the scarcity of efficient electron-transporting molecules and ...

• Molecular Separation by Using Active and Passive Microfluidic chip Designs: A Comprehensive Review 

  Ebrahimi, Aliakbar; Icoz, Kutay; Didarian, Reza; Shih, Chih-Hsin; Tarim, E. Alperay; Nasseri, Behzad; Akpek, Ali; Cecen, Berivan; Bal-Ozturk, Ayca; Gulec, Kadri; Li, Yi-Chen Ethan; Shih, Steven; Tarim, Burcu Sirma; Tekin, H. Cumhur; Alarcin, Emine; Tayybi-Azar, Mehdi; Ghorbanpoor, Hamed; Ozel, Ceren; Sariboyaci, Ayla Eker; Guzel, Fatma Dogan; Bassous, Nicole; Shin, Su Ryon; Avci, Huseyin (WILEY Advanced, 2024)

  Separation and identification of molecules and biomolecules such as nucleic acids, proteins, and polysaccharides from complex fluids are known to be important due to unmet needs in various applications. Generally, ...

• Effect of bio-mimicked surface texturing on the shear strength of additively manufactured metal single-lap joints: An innovative approach 

  Atahan, M. Gokhan; Maskery, Ian; Ashcroft, Ian; Apalak, M. Kemal; Pappas, Athanasios (PERGAMON-ELSEVIER SCIENCE LTD, 2025)

  In this paper, we investigate the mechanical performance of metal single-lap joints featuring bio-mimicking surface textures. The inspiration for the surface textures was the foot and toe of the gecko, a creature whose ...

• Macronutrients in diets differentially affect gastrointestinal cytokine and tight junction protein levels 

  Ulutas, M. S.; Cebeci, A. (UNIV PUTRA MALAYSIA PRESS, 2025)

  Western diet is known to result in intestinal inflammation and loss of barrier function. In the present work, we investigated whether other macronutrients contribute to inflammation and destabilising barrier function in ...

• CompreCity: Accelerating the Traveling Salesman Problem on GPU with data compression 

  Yalcin, Salih; Usul, Hamdi Burak; Yalcin, Gulay (ELSEVIER, 2025)

  Traveling Salesman Problem (TSP) is one of the significant problems in computer science which tries to find the shortest path for a salesman who needs to visit a set of cities and it is involved in many computing problems ...

• Stress and damage distribution analysis of steel reinforced geopolymer concrete beams: Finite element method and experimental comparison under varying design parameters 

  Ozbayrak, Ahmet; Kucukgoncu, Hurmet; Aslanbay, Huseyin Hilmi; Aslanbay, Yuksel Gul (ELSEVIER, 2025)

  Geopolymer concrete (GPC) is a sustainable and eco-friendly alternative to ordinary Portland cement-based concrete (OPC). However, its application in reinforced concrete structures remains limited due to insufficient ...

• Did Liberal Lockdown Policies Change Spatial Behaviour in Sweden? Mapping Daily Mobilities in Stockholm Using Mobile Phone Data During COVID-19 

  Shuttleworth, Ian; Toger, Marina; Turk, Umut; Osth, John (SPRINGER Nature Link, 2024)

  Sweden had the most liberal lockdown policies in Europe during the Covid-19 pandemic. Relying on individual responsibility and behavioural nudges, their effectiveness was questioned from the perspective of others who ...

• Exploring CsPbX3 (X = Cl, Br, I) Perovskite Nanocrystals in Amorphous Oxide Glasses: Innovations in Fabrication and Applications 

  Samiei, Sadaf; Soheyli, Ehsan; Vighnesh, Kunnathodi; Nabiyouni, Gholamreza; Rogach, Andrey L. (WILEY Online Library, 2024)

  Metal halide perovskites with excellent optical and electronic properties have become a trending material in the current research. However, their limited stability under ambient conditions degrades quality and threatens ...

• A functional barley-based fermented soup (tarhana) with high β-glucan content 

  Koksel, Hamit; Ozkan, Kubra; Tekin-Cakmak, Zeynep Hazal; Karasu, Salih; Kahraman, Kevser; Oruc, Sena; Sagdic, Osman; Sestili, Francesco (SPRINGER, 2025)

  This study investigates the impact of using different flours, including high beta-glucan barley, on the nutritional properties of tarhana. Mineral composition, phenolic content, and antioxidant capacity of tarhana powder ...

• Rural Feet Voting of Leisure Explorers 

  Turk, Umut; Toger, Marina; Osth, John; Kourtit, Karima; Nijkamp, Peter (WILEY Online Library, 2025)

  In the COVID-19 period, spatial leisure behavior, often driven by the desire to escape urban life, reflected health and environmental concerns. This study examines how pandemic-induced spatial motives and changes impacted ...

• Ground failures and foundation performances in Adıyaman-Gölbaşı following the 6 February 2023 Kahramanmaraş-Türkiye Earthquake Sequence 

  Cetin, Kemal Onder; Moug, Diane; Soylemez, Berkan; Ayhan, Bilal Umut; Zarzour, Moutasem; Suhaily, Ahmed Al; Akil, Bulent; Unutmaz, Berna; Firat, Seyhan; Tekin, Erhan; Cakir, Elife; Frost, David; Macedo, Jorge; Bray, Jonathan; Moss, Robb; Bassal, Patrick; Gurbuz, Ayhan; Isik, Nihat Sinan; Akin, Muge; Sahin, Arda; Duman, Emre (SAGE PUBLICATIONS INC, 2025)

  The 6 February 2023 Kahramanmara & scedil;-T & uuml;rkiye earthquake sequence (M7.8 and M7.6) presents an exceptional opportunity to investigate both the effects of local soil conditions on damage patterns under strong ...

• ATOM: AI-Powered Sustainable Resource Management for Serverless Edge Computing Environments 

  Golec, Muhammed; Gill, Sukhpal Singh; Cuadrado, Felix; Parlikad, Ajith Kumar; Xu, Minxian; Wu, Huaming; Uhlig, Steve (IEEE-INST ELECTRICAL ELECTRONICS ENGINEERS INC, 2024)

  Serverless edge computing decreases unnecessary resource usage on end devices with limited processing power and storage capacity. Despite its benefits, serverless edge computing's zero scalability is the major source of ...

• Unravelling the moderating roles of environmental regulations on the impact of foreign direct investment on environmental sustainability 

  Ehigiamusoe, Kizito Uyi; Chen, Danqing; Dogan, Eyup; Binsaeed, Rima H. (ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD, 2025)

  In the era of economic globalization, China attracts significant foreign direct investment (FDI) to accelerate economic prosperity. FDI inflows could have ramifications on environmental degradation (ED) despite the enactment ...

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